Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
---|---|---|---|---|---|---|---|---|---|
KIRP | rs151173804 | chr17:80817328 | G/A | 6.93E-5 | 214 | 15.88 | 16.13 | 15.15 | KM Plot |
KIRP | rs151186946 | chr11:42229793 | G/A | 2.27E-8 | 214 | 15.88 | 15.48 | 10.6 | KM Plot |
KIRP | rs151305310 | chr11:8545121 | G/A | 0.000456 | 213 | 15.88 | 17.2 | 4.82 | KM Plot |
KIRP | rs1523134 | chr17:47195662 | C/A | 1.67E-5 | 203 | 5.57 | 17.03 | 16.47 | KM Plot |
KIRP | rs1547205 | chr9:98815145 | C/G | 0 | 214 | 2.52 | 15.65 | 16.43 | KM Plot |
KIRP | rs1570807 | chr1:179061108 | A/G | 0.000526 | 214 | 13.03 | 14.85 | 16.53 | KM Plot |
KIRP | rs1576295 | chr1:89603710 | G/A | 9.99E-5 | 211 | 10 | 19.47 | 14.1 | KM Plot |
KIRP | rs15988 | chr21:30244800 | A/G | 0.000397 | 213 | 17 | 15.07 | 1.17 | KM Plot |
KIRP | rs1623489 | chr5:79926115 | T/C | 0.000105 | 214 | 18.65 | 14.83 | 9.77 | KM Plot |
KIRP | rs1643634 | chr5:79927899 | G/A | 0.000127 | 213 | 18.65 | 14.4 | 9.77 | KM Plot |
KIRP | rs1643635 | chr5:79928216 | G/A | 4.11E-7 | 212 | 18.03 | 14.85 | 7.47 | KM Plot |
KIRP | rs1643636 | chr5:79928767 | A/G | 0.000105 | 214 | 18.65 | 14.83 | 9.77 | KM Plot |
KIRP | rs1643637 | chr5:79928909 | T/A | 0.000105 | 214 | 18.65 | 14.83 | 9.77 | KM Plot |
KIRP | rs1643638 | chr5:79930256 | T/C | 0.000105 | 214 | 18.65 | 14.83 | 9.77 | KM Plot |
KIRP | rs1643639 | chr5:79952390 | T/C | 0.000105 | 213 | 18.65 | 14.85 | 9.77 | KM Plot |